{ "_id": "6a1ede46b401979e734102f5", "Package": "codyn", "Title": "Community Dynamics Metrics", "Version": "2.0.5", "Authors@R": "c(person(\"Lauren\", \"Hallett\", email=\"lauren.m.hallett@gmail.com\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-0718-0257\")),\nperson(\"Meghan L.\", \"Avolio\", email=\"meghan.avolio@jhu.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-2649-9159\")),\nperson(\"Ian T.\", \"Carroll\", email=\"carroll.ian@gmail.com\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-3616-810X\")),\nperson(\"Sydney K.\", \"Jones\", email=\"syd@sevilleta.unm.edu\", role=c(\"aut\")),\nperson(\"A. Andrew M.\", \"MacDonald\", email=\"a.a.m.macdonald@gmail.com\", role=c(\"aut\"), comment=c(ORCID = \"0000-0003-1162-169X\")),\nperson(\"Dan F. B.\", \"Flynn\", email=\"flynn@fas.harvard.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-2978-5257\")),\nperson(\"Peter\", \"Slaughter\", email=\"slaughter@nceas.ucsb.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-2192-403X\")),\nperson(\"Julie\", \"Ripplinger\", email=\"julie.ripplinger@asu.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-2771-6637\")),\nperson(\"Scott L.\", \"Collins\", email=\"scollins@sevilleta.unm.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-0193-2892\")),\nperson(\"Corinna\", \"Gries\", email=\"cgries@wisc.edu\", role=c(\"aut\"), comment=c(ORCID = \"0000-0002-9091-6543\")),\nperson(\"Matthew B.\", \"Jones\", email=\"jones@nceas.ucsb.edu\", role=c(\"aut\", \"cre\"), comment=c(ORCID = \"0000-0003-0077-4738\")))", "Date": "2020-11-30", "Description": "Univariate and multivariate temporal and spatial diversity\nindices, rank abundance curves, and community stability\nmeasures. The functions implement measures that are either\nexplicitly temporal and include the option to calculate them\nover multiple replicates, or spatial and include the option to\ncalculate them over multiple time points. Functions fall into\nfive categories: static diversity indices, temporal diversity\nindices, spatial diversity indices, rank abundance curves, and\ncommunity stability measures. The diversity indices are\ntemporal and spatial analogs to traditional diversity indices.\nSpecifically, the package includes functions to calculate\ncommunity richness, evenness and diversity at a given point in\nspace and time. In addition, it contains functions to calculate\nspecies turnover, mean rank shifts, and lags in community\nsimilarity between two time points. Details of the methods are\navailable in Hallett et al. (2016)\n and Avolio et al. (2019)\n.", "Encoding": "UTF-8", "License": "Apache License (== 2.0)", "URL": "https://github.com/NCEAS/codyn/", "BugReports": "https://github.com/NCEAS/codyn/issues", "LazyData": "true", "VignetteBuilder": "knitr", "RoxygenNote": "7.1.1", "Repository": "https://nceas.r-universe.dev", "Date/Publication": "2020-12-01 02:49:39 UTC", "RemoteUrl": "https://github.com/NCEAS/codyn", "RemoteRef": "HEAD", "RemoteSha": "d09e65b2d73bdf7f82e6953326b7dbd2c2a8198b", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-20 07:57:01 UTC", "User": "root" }, "Author": "Lauren Hallett [aut] (ORCID: ),\nMeghan L. Avolio [aut] (ORCID: ),\nIan T. Carroll [aut] (ORCID: ),\nSydney K. Jones [aut],\nA. Andrew M. MacDonald [aut] (ORCID:\n),\nDan F. B. Flynn [aut] (ORCID: ),\nPeter Slaughter [aut] (ORCID: ),\nJulie Ripplinger [aut] (ORCID: ),\nScott L. Collins [aut] (ORCID: ),\nCorinna Gries [aut] (ORCID: ),\nMatthew B. Jones [aut, cre] (ORCID:\n)", "Maintainer": "Matthew B. Jones ", "MD5sum": "2f65456d18a4154a9c74a129f958d75b", "_user": "nceas", "_type": "src", "_file": "codyn_2.0.5.tar.gz", "_fileid": "c8b93fd43267eb3bdde59f8b9331a88f9228b547997e30f0bbd3f72ec791dbfb", "_filesize": 1080940, "_sha256": "c8b93fd43267eb3bdde59f8b9331a88f9228b547997e30f0bbd3f72ec791dbfb", "_created": "2026-05-20T07:57:01.000Z", "_published": "2026-06-02T13:44:38.177Z", "_distro": "noble", "_jobs": [ { "job": 79085074029, "time": 226, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7104414248" }, { "job": 79085074041, "time": 190, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7104401675" }, { "job": 79085074303, "time": 138, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7104384185" }, { "job": 79085073910, "time": 145, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7104386823" }, { "job": 79085072835, "time": 211, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7104335759" }, { "job": 79085072441, "time": 119, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7359448325" }, { "job": 79085073292, "time": 137, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7104384022" }, { "job": 79085074096, "time": 137, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7104384092" }, { "job": 79085073948, "time": 124, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7104379820" } ], "_buildurl": "https://github.com/r-universe/nceas/actions/runs/26149189112", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/NCEAS/codyn", "_commit": { "id": "d09e65b2d73bdf7f82e6953326b7dbd2c2a8198b", "author": "Matt Jones ", "committer": "Matt Jones ", "message": "Switch to Travis.com\n", "time": 1606790979 }, "_maintainer": { "name": "Matthew B. 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