{
  "_id": "6a1f2e32b401979e73426979",
  "Package": "metajam",
  "Type": "Package",
  "Title": "Easily Download Data and Metadata from 'DataONE'",
  "Version": "0.3.1.9000",
  "Date": "2024-08-06",
  "Authors@R": "c(\nperson(\"Julien\", \"Brun\",\nemail = \"julien.brun@alumni.duke.edu\",\ncomment = c(ORCID = \"0000-0002-7751-6238\"),\nrole = c(\"cre\", \"aut\")),\nperson(\"Irene\", \"Steves\",\ncomment = c(ORCID = \"0000-0002-5511-9717\",\n\"https://github.com/isteves\"),\nrole = \"aut\"),\nperson(\"Mitchell\", \"Maier\",\ncomment= c(ORCID = \"0000-0001-6955-0535\"),\nrole = \"aut\"),\nperson(\"Kristen\", \"Peach\",\nemail = \"peach@nceas.ucsb.edu\",\ncomment = c(ORCID = \"0000-0002-6388-0901\"),\nrole = \"aut\"),\nperson(\"Nicholas\", \"Lyon\",\nemail = \"lyon@nceas.ucsb.edu\",\ncomment = c(ORCID = \"0000-0003-3905-1078\",\n\"https://njlyon0.github.io/\"),\nrole = \"aut\"),\nperson(\"Nathan\", \"Hwangbo\",\nemail = \"nathanhwangbo@gmail.com\",\ncomment= c(ORCID = \"0000-0002-3777-0821\"),\nrole = \"ctb\"),\nperson(\"Derek\", \"Strong\",\nemail = \"dstrong@nceas.ucsb.edu\",\ncomment= c(ORCID = \"0000-0002-0347-8574\"),\nrole = \"ctb\"),\nperson(\"Colin\", \"Smith\",\nemail = \"colin.smith@wisc.edu\",\ncomment = c(ORCID = \"0000-0003-2261-9931\"),\nrole = \"ctb\"),\nperson(\"Regents of the University of California\",\nrole = \"cph\")\n)",
  "Maintainer": "Julien Brun <julien.brun@alumni.duke.edu>",
  "Description": "A set of tools to foster the development of reproducible\nanalytical workflow by simplifying the download of data and\nmetadata from 'DataONE' (<https://www.dataone.org>) and easily\nimporting this information into R.",
  "License": "Apache License (== 2.0)",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "RoxygenNote": "7.3.2",
  "SystemRequirements": "Mac OSX: redland (>= 1.0.14) ; Linux: librdf0 (>=\n1.0.14), librdf0-dev (>= 1.0.14)",
  "URL": "https://nceas.github.io/metajam/, https://github.com/NCEAS/metajam",
  "BugReports": "https://github.com/NCEAS/metajam/issues",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libicu-dev libjq-dev libuv1-dev\nlibxml2-dev libssl-dev librdf0-dev libnode-dev libx11-dev",
  "Repository": "https://nceas.r-universe.dev",
  "Date/Publication": "2024-08-20 20:59:45 UTC",
  "RemoteUrl": "https://github.com/NCEAS/metajam",
  "RemoteRef": "HEAD",
  "RemoteSha": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-15 09:33:20 UTC",
    "User": "root"
  },
  "Author": "Julien Brun [cre, aut] (ORCID: <https://orcid.org/0000-0002-7751-6238>),\nIrene Steves [aut] (ORCID: <https://orcid.org/0000-0002-5511-9717>,\nhttps://github.com/isteves),\nMitchell Maier [aut] (ORCID: <https://orcid.org/0000-0001-6955-0535>),\nKristen Peach [aut] (ORCID: <https://orcid.org/0000-0002-6388-0901>),\nNicholas Lyon [aut] (ORCID: <https://orcid.org/0000-0003-3905-1078>,\nhttps://njlyon0.github.io/),\nNathan Hwangbo [ctb] (ORCID: <https://orcid.org/0000-0002-3777-0821>),\nDerek Strong [ctb] (ORCID: <https://orcid.org/0000-0002-0347-8574>),\nColin Smith [ctb] (ORCID: <https://orcid.org/0000-0003-2261-9931>),\nRegents of the University of California [cph]",
  "MD5sum": "64efa550e79ab1f216cf9e3c1390db8e",
  "_user": "nceas",
  "_type": "src",
  "_file": "metajam_0.3.1.9000.tar.gz",
  "_fileid": "44090416d68f457faf948452e5bb877dc3ac1334614b0ef5714890d65c88d68b",
  "_filesize": 2911409,
  "_sha256": "44090416d68f457faf948452e5bb877dc3ac1334614b0ef5714890d65c88d68b",
  "_created": "2026-05-15T09:33:20.000Z",
  "_published": "2026-06-02T19:25:38.580Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79153990333,
      "time": 177,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7014194931"
    },
    {
      "job": 79153990328,
      "time": 166,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014192100"
    },
    {
      "job": 79153990291,
      "time": 126,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7014179884"
    },
    {
      "job": 79153990205,
      "time": 95,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014169844"
    },
    {
      "job": 79153989810,
      "time": 177,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014140618"
    },
    {
      "job": 79153989545,
      "time": 128,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7367693083"
    },
    {
      "job": 79153990281,
      "time": 110,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7014174493"
    },
    {
      "job": 79153990273,
      "time": 103,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7014172998"
    },
    {
      "job": 79153990287,
      "time": 103,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7014172260"
    }
  ],
  "_buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/NCEAS/metajam",
  "_commit": {
    "id": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
    "author": "Julien Brun <brunj7@users.noreply.github.com>",
    "committer": "Julien Brun <brunj7@users.noreply.github.com>",
    "message": "Increment version number to 0.3.1.9000\n",
    "time": 1724187585
  },
  "_maintainer": {
    "name": "Julien Brun",
    "email": "julien.brun@alumni.duke.edu",
    "orcid": "0000-0002-7751-6238"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.0",
      "role": "Depends"
    },
    {
      "package": "dataone",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "EML",
      "role": "Imports"
    },
    {
      "package": "emld",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "readr",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "XML",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "nceas",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "data",
    "data-analysis",
    "metadata",
    "repositories"
  ],
  "_stars": 16,
  "_contributors": [
    {
      "user": "brunj7",
      "count": 278,
      "uuid": 5761340
    },
    {
      "user": "njlyon0",
      "count": 86,
      "uuid": 21199610
    },
    {
      "user": "isteves",
      "count": 52,
      "uuid": 25118334
    },
    {
      "user": "maier-m",
      "count": 15,
      "uuid": 16710796
    },
    {
      "user": "drkrynstrng",
      "count": 7,
      "uuid": 36723171
    },
    {
      "user": "kristenpeach",
      "count": 4,
      "uuid": 36461830
    },
    {
      "user": "clnsmth",
      "count": 2,
      "uuid": 25492069
    },
    {
      "user": "katrinleinweber",
      "count": 1,
      "uuid": 9948149
    },
    {
      "user": "robyngit",
      "count": 1,
      "uuid": 26600641
    }
  ],
  "_userbio": {
    "uuid": 2159348,
    "type": "organization",
    "name": "National Center for Ecological Analysis and Synthesis"
  },
  "_downloads": {
    "count": 21,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/metajam"
  },
  "_devurl": "https://github.com/nceas/metajam",
  "_pkgdown": "https://nceas.github.io/metajam/",
  "_searchresults": 81,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/metajam.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.2.3",
      "date": "2020-11-03"
    },
    {
      "version": "0.3.0",
      "date": "2024-07-03"
    },
    {
      "version": "0.3.1",
      "date": "2024-08-16"
    }
  ],
  "_exports": [
    "check_version",
    "download_d1_data",
    "download_d1_data_pkg",
    "read_d1_files",
    "tabularize_eml"
  ],
  "_help": [
    {
      "page": "check_version",
      "title": "Check PID version",
      "topics": [
        "check_version"
      ]
    },
    {
      "page": "download_d1_data",
      "title": "Download data and metadata from DataONE",
      "topics": [
        "download_d1_data"
      ]
    },
    {
      "page": "download_d1_data_pkg",
      "title": "Download all data and metadata of a data package from DataONE",
      "topics": [
        "download_d1_data_pkg"
      ]
    },
    {
      "page": "read_d1_files",
      "title": "Read data and metadata based on `download_d1_data()` file structure",
      "topics": [
        "read_d1_files"
      ]
    },
    {
      "page": "tabularize_eml",
      "title": "Get tabular metadata",
      "topics": [
        "tabularize_eml"
      ]
    }
  ],
  "_readme": "https://github.com/NCEAS/metajam/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "base64enc",
    "bit",
    "bit64",
    "brew",
    "bslib",
    "cachem",
    "callr",
    "cli",
    "clipr",
    "commonmark",
    "cpp11",
    "crayon",
    "curl",
    "dataone",
    "datapack",
    "desc",
    "digest",
    "dplyr",
    "EML",
    "emld",
    "evaluate",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "glue",
    "highr",
    "hms",
    "htmltools",
    "httr",
    "jqr",
    "jquerylib",
    "jsonld",
    "jsonlite",
    "knitr",
    "lazyeval",
    "lifecycle",
    "lubridate",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "parsedate",
    "pillar",
    "pkgbuild",
    "pkgconfig",
    "pkgload",
    "plyr",
    "prettyunits",
    "processx",
    "progress",
    "ps",
    "purrr",
    "R6",
    "rappdirs",
    "Rcpp",
    "readr",
    "redland",
    "rlang",
    "rmarkdown",
    "roxygen2",
    "rprojroot",
    "sass",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "tinytex",
    "tzdb",
    "utf8",
    "uuid",
    "V8",
    "vctrs",
    "vroom",
    "withr",
    "xfun",
    "XML",
    "xml2",
    "yaml",
    "zip"
  ],
  "_vignettes": [
    {
      "source": "use01_dataset-single-arctic.Rmd",
      "filename": "use01_dataset-single-arctic.html",
      "title": "Use Case 1 - Processing a Single Dataset from Arctic Data Center",
      "author": "Julien Brun, Mitchell Maier and Irene Steves, NCEAS",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Libraries and constants",
        "Download the dataset",
        "Read the data and metadata in your R environment",
        "Structure of the named list object"
      ],
      "created": "2024-04-16 16:23:04",
      "modified": "2024-04-16 16:23:04",
      "commits": 1
    },
    {
      "source": "use02_dataset-single-dataone.Rmd",
      "filename": "use02_dataset-single-dataone.html",
      "title": "Use Case 2 - Processing a Single Dataset from DataOne",
      "author": "Julien Brun and Kristen Peach, NCEAS",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Note on data url provenance when using download_d1_data.R",
        "Metadata format dictates metajam output",
        "Example 1: eml",
        "Libraries and constants",
        "Download the dataset",
        "Read the data and metadata in your R environment",
        "Structure of the named list object",
        "Example 2: iso"
      ],
      "created": "2024-04-16 16:23:04",
      "modified": "2024-04-16 16:23:04",
      "commits": 1
    },
    {
      "source": "use03_dataset-batch-processing.Rmd",
      "filename": "use03_dataset-batch-processing.html",
      "title": "Use Case 3 - Processing Several Datasets",
      "author": "Julien Brun, Mitchell Maier, Irene Steves and Kristen Peach, NCEAS",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Libraries",
        "Constants",
        "Download the datasets",
        "Read the data and metadata in your R environment",
        "Perform checks on data structure",
        "Conclusion",
        "Perform checks on the units",
        "Fixing units discrepancies",
        "Append all the sampling sites into one master dataset",
        "General Conclusion"
      ],
      "created": "2024-04-16 16:23:04",
      "modified": "2024-07-02 20:21:19",
      "commits": 3
    },
    {
      "source": "use04_reading-raster.Rmd",
      "filename": "use04_reading-raster.html",
      "title": "Use Case 4 - Processing a Raster Dataset",
      "author": "Julien Brun, Mitchell Maier, Derek Strong and Irene Steves, NCEAS",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Libraries and constants",
        "Download the raster dataset",
        "Read the raster file and metadata in your R environment",
        "Investigate the metadata"
      ],
      "created": "2024-04-16 16:23:04",
      "modified": "2024-04-16 16:23:04",
      "commits": 1
    },
    {
      "source": "use05_package-download.Rmd",
      "filename": "use05_package-download.html",
      "title": "Use Case 5 - Downloading Entire Data Packages Using DOIs",
      "author": "Julien Brun, Mitchell Maier and Irene Steves, NCEAS",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Libraries and constants",
        "Download all the datasets from data packages using DOIs"
      ],
      "created": "2024-04-16 16:23:04",
      "modified": "2024-04-16 16:23:04",
      "commits": 1
    }
  ],
  "_score": 6.413634997198556,
  "_indexed": true,
  "_nocasepkg": "metajam",
  "_universes": [
    "nceas"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:35:57.000Z",
      "distro": "noble",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "89751738a1fbd5d40389e245b83787c2e5864714ba10dbf6190080438ae89fe1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:35:48.000Z",
      "distro": "noble",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "f5888eb3f7fb255e8a56cc299a74c20193b7c3d252e6937fd1711ff53bcd6f2a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:35:11.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "44c47ec8c846d884521441ff4b185be48a2eebac87cfc575f95704bff9eba092",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:34:49.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "747d360c7519d7fea6a8d0189b45ef9546500054aa2e54098b0c9848da59bc09",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:34:46.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "834aed4107211a557f572ee2ba257987c45527f0252859c8920c4c39e9e2c4be",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:34:40.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "0c53edf141bdb2908c0b147536266d9378aea2d2ad9aad0165de15f89d26ec26",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.3.1.9000",
      "date": "2026-05-15T09:34:40.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "4dbe819e5c828b8bdb01f71c6acf5f2de49e7059b9823998ca2fd37f06ebe24b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.1.9000",
      "date": "2026-06-02T19:25:18.000Z",
      "commit": "5e743ab1d8bc7fcc4faeafe54696fc331f64f837",
      "fileid": "f4d28c0b11f8a537a8cac5977a7268472864420dd93279ce04cce752dc0df4c0",
      "status": "success",
      "buildurl": "https://github.com/r-universe/nceas/actions/runs/25910685531"
    }
  ]
}